FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754160

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754160
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences377386530
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATCGCG212850.010.02014720-24
AGCGTCG1329600.09.3989729
TGGCCCG891250.08.2956695
GAGCGTC1590700.08.0703828
ATCGGAA1916850.06.76778171
TCGGAAG2033250.06.42139432
AGAGCGT2036400.06.40357887
GATCCGT405000.06.36331221
ATCGCGG354250.06.20475220-24
CGGAAGA2345250.05.66267163
TCGCGGC420350.05.404966420-24
GTATGGC1589250.05.30643562
AAGAGCG2574150.05.20096356
GGCCCGG1499500.05.1191796
Produced by FastQC (version 0.11.5)