FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754161

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754161
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences461721497
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1005950.018.59971
TCGGAAG1151300.016.3076862
TATCGCG252000.014.3751820-24
CGGAAGA1407800.013.4187323
TGGCCCG1031850.013.2905145
ATCGCGG333800.011.05204920-24
CCGGGGG1492850.09.2057339
GGCCCGG1600400.08.8902176
TCGCGGC452750.08.38830920-24
GCCCGGG1829000.07.9334557
CCCGGGG1841700.07.75687078
GTATGGC1939100.07.61369372
GGATCCG498400.07.49635274
GATCCGT450150.06.78804971
TATGCCG618300.06.578092645-49
TTCGCGA147350.05.98913330-34
CTCGTAT723150.05.918826640-44
GTACTGG2707250.05.8895051
TATGGCC2696450.05.86997373
ATGGCCC2755500.05.63381674
Produced by FastQC (version 0.11.5)