FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754171

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754171
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences370875458
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATCGCG190200.011.55701520-24
GGATCCG392200.08.9277884
TGGCCCG787200.08.849995
ATCGCGG259350.08.70481220-24
ACCGCGC890250.07.4026891
GATCCGT352150.07.3086681
TCGCGGC339100.06.965468420-24
GGCCCGG1258300.05.7497736
TCCGGCG189900.05.6880667
TTCGCGA110000.05.51054130-34
CTAGTAC1249300.05.4894049
CCGCGCC1270200.05.31353572
GTATGGC1482000.05.24876982
TCGCGCT161550.05.1605435
ACCGTGC1066550.05.1186021
CCGGGGG1409150.05.1136389
GCCCGGG1454250.05.09964477
Produced by FastQC (version 0.11.5)