FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754173

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754173
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences395577101
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1309550.031.640831
TCGGAAG1402700.029.529322
CGGAAGA1638600.025.2913933
CGCGAAA604000.013.45420235-39
TCCGCGA627300.013.22775830-34
CCGCGAA647300.012.50584730-34
TGGCCCG804750.011.7485155
AGAGCAC3844800.011.3997567
GGATCCG420200.011.2931794
TATGCCG741850.011.29031445-49
TATCGCG240100.011.03110820-24
AGCACAC4121750.010.7074939
GAGCACA4242050.010.4345358
GAAGAGC4306900.010.1749645
CTCGTAT849450.09.99689440-44
CTCCGCG855800.09.94636230-34
CGTATGC868600.09.662845-49
ATCGCGG305650.08.79795120-24
ACTCCGC985900.08.7263730-34
TCTCGTA738650.08.55418440-44
Produced by FastQC (version 0.11.5)