FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754197

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754197
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences374415314
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATCGCG148700.012.7138029
ATCGGAA976600.012.2467111
TCGGAAG1062300.011.2166882
CGGAAGA1273500.09.3792393
ACCGCGC928200.08.6942621
ATCGCGG201600.07.59840620-24
GATCCGT345800.07.1017241
TGGCCCG756700.06.2507975
CCGCGCC1302150.06.15233662
TCGCGGC283650.05.661024620-24
CGCGCCC1066550.05.44677073
CGCGATC601550.05.4185963
ACCGTGC1091000.05.4115531
ATATCGC415650.05.28032648
GATATCG413150.05.2421497
GCGCGAT595200.05.1113112
TATGCCG517850.05.000513645-49
Produced by FastQC (version 0.11.5)