FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754198

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754198
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences374415314
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC443800.020.857163
CCGATCT550200.016.4680062
TTCCGAT584500.016.0720792
CTTCCGA716300.013.3981441
CGATCTA355050.09.6978515
AGCGTCG1317950.08.7286829
GATCCGT379700.07.8842621
TATCGCG178100.07.677661420-24
GAGCGTC1660350.07.0552188
ACCGCGC966700.06.70343541
ATCGGAA1927450.06.26908351
TCGGAAG2020850.05.99727252
AGAGCGT2069700.05.76830777
CGGAAGA2321250.05.2554973
ATCGCGG275150.05.227852320-24
ACCGTGC1059000.05.1266951
Produced by FastQC (version 0.11.5)