FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754200

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754200
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences358055352
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG1524300.036.811219
GAGCGTC1865700.030.1956718
TCCGATC522250.028.9974233
ATCGGAA2130650.026.8643471
TCGGAAG2212650.025.873582
AGAGCGT2264550.025.0629677
TTCCGAT639950.023.854182
CCGATCT625650.023.3825574
CGGAAGA2560650.022.3908583
AAGAGCG2804400.020.4190446
CTTCCGA772700.020.3176671
CGATCTA389050.014.03113655
CGCCGTA816200.013.3128555-59
GAAGAGC4851950.012.177125
TCGCCGT897150.012.05990455-59
GTCGCCG1019600.011.006947555-59
GCCGTAT1040250.010.6783255-59
TGGTCGC1172850.09.7485250-54
GGTCGCC1159650.09.62312750-54
ACCGCGC1003250.09.5798921
Produced by FastQC (version 0.11.5)