FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754202

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754202
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences382865227
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC620050.038.989133
TTCCGAT686500.035.57392
CCGATCT732100.032.2101364
CTTCCGA822850.029.9169731
AGCGTCG1397150.021.1363169
CGATCTA411600.019.3384045
GAGCGTC1761550.016.8833488
ATCGGAA1971050.015.6006851
TCGGAAG2090700.014.7113432
AGAGCGT2155750.013.9405997
CGGAAGA2359700.013.0405323
AAGAGCG2666600.011.5928256
ACCGCGC1033250.010.2287551
CGATCTT910100.09.391145
CGCCGTA672000.08.7317555-59
CGCGATC500400.08.271673
CGATCTG577950.08.2282455
TATCGCG177150.08.0218189
GCGCGAT490600.07.91969062
TCGCCGT757950.07.78176855-59
Produced by FastQC (version 0.11.5)