FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754203

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754203
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences413573762
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1233750.025.3134161
TCGGAAG1348300.023.2057952
CGGAAGA1580550.019.7821273
TGGCCCG967850.011.9909685
TATCGCG258500.011.93604120-24
TATGCCG683750.09.75478745-49
GGATCCG477400.09.2565094
ATCGCGG344800.09.15872820-24
CTCGTAT784150.08.74971540-44
AGAGCAC3879700.08.6061387
TCGTATC730800.08.3232135-39
CGTATGC816600.08.15182945-49
AGCACAC4105600.08.1379029
TCTCGTA769900.07.969825340-44
GAGCACA4284400.07.8456298
GAAGAGC4385500.07.75065955
GGCCCGG1565900.07.6010456
GTCACGA915300.07.446765425-29
TATCTCG828400.07.438523340-44
GTATGGC1726900.07.29931072
Produced by FastQC (version 0.11.5)