FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754209

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754209
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences376794601
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGCCCG778400.010.6283245
GGATCCG391850.010.5379454
TATCGCG219250.010.35914620-24
ACCGCGC931800.08.9891251
ATCGCGG287300.08.12240820-24
GGCCCGG1181200.07.29222256
CTAGTAC1316050.07.14502539
GATCCGT376500.06.8306945
CCGGGGG1242050.06.8008159
TCGCGGC353100.06.70731820-24
CCGCGCC1285250.06.6003992
GGGGATC1626900.06.3230762
GCCATAC1535350.06.13390253
GCCCGGG1409650.06.1207127
CCCGGGG1444050.05.9698888
GTATGGC1569850.05.8745032
CGCGCCC1044150.05.77940373
CGCGATC590250.05.4984833
GCGCGAT585300.05.35932732
ACCGTGC1088450.05.29891441
Produced by FastQC (version 0.11.5)