FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754210

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754210
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences376794601
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGATCCG460950.09.2001794
TGGCCCG885150.08.9269655
TATCGCG260900.07.86892620-24
ACCGCGC908250.07.6703821
GATCCGT430350.07.09176735
CTAGTAC1332400.06.7085689
CGCGATC467550.05.7367763
GCCATAC1546100.05.6874483
GGCCCGG1464100.05.60492666
GTATGGC1628450.05.52448232
GGGATCC1933200.05.11858653
CCGCGCC1392250.05.0610812
ATCGCGG426800.05.04461920-24
GGGGATC1842350.05.0404722
GCGCGAT499100.05.01101542
Produced by FastQC (version 0.11.5)