FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754211

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754211
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences369428296
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGCCCG915450.018.3006175
GGATCCG500350.017.1107184
CTAGTAC1331300.013.0030949
GGCCCGG1360400.012.51730256
TATCGCG398100.012.40471120-24
CCGGGGG1459950.011.5844029
GATCCGT470250.011.5828065
GCCCGGG1577600.010.9454617
ATCGCGG466350.010.68250520-24
GTATGGC1651000.010.6474912
GCCATAC1632000.010.4962853
GGGGATC1814550.010.4222752
CCCGGGG1638750.010.4132748
ACCGCGC968150.010.3788971
TACTAGT1912350.09.3855267
TCGCGGC544250.09.286612520-24
ACTAGTA1941200.09.2012658
GGGATCC2236250.08.641523
GGCCATA2112400.08.3526772
ATACTAG2201250.08.3347116
Produced by FastQC (version 0.11.5)