FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754213

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754213
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences353560205
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGATCCG388600.011.2996534
ATCGGAA917500.010.4277951
TGGCCCG768200.010.2246925
TATCGCG210600.09.82905320-24
TCGGAAG1006850.09.44920352
CGGAAGA1225200.07.87757353
CTAGTAC1219700.07.6754669
GATCCGT370500.07.6468725
ATCGCGG284150.07.499140720-24
GGCCCGG1181000.06.9146356
GCCATAC1445700.06.47058153
CCGGGGG1282250.06.2838729
TCGCGGC358550.06.080508720-24
GCCCGGG1388700.05.9535017
GGGGATC1585250.05.92382862
GTATGGC1473900.05.7125942
TACTAGT1787150.05.58300737
CCCGGGG1438400.05.56644448
ACTAGTA1794500.05.5318758
ACCGCGC890900.05.49160671
Produced by FastQC (version 0.11.5)