FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754216

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754216
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences486578172
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC431300.012.2395563
CCGATCT566700.09.5178444
TATCGCG244100.08.62408630-34
TTCCGAT690800.08.103882
GGATCCG492550.07.47708374
CTTCCGA849700.06.8956691
CTAGTAC1706700.06.88497549
GATCCGT486100.06.02490765
GCCATAC2003250.05.85675533
GGGGATC2148150.05.4888832
CGATCTA374350.05.46092135
ATCGCGG408350.05.446368730-34
TGACCGG549950.05.246628145
TACTAGT2535750.05.0142267
Produced by FastQC (version 0.11.5)