FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754223

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754223
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences327534222
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGATCCG369000.012.8102524
TGGCCCG750600.012.5275955
TATCGCG199050.011.72088120-24
ATCGCGG261200.09.13185820-24
ATCGGAA790700.08.885641
CCGGGGG1108000.08.525789
GGCCCGG1160600.08.3768496
TCGGAAG893750.07.70672662
CTAGTAC1113250.07.68455559
TCCGGCG190100.07.47493557
GCCCGGG1342150.07.44897847
GTATGGC1365900.07.41549062
CCCGGGG1372200.07.1114638
GATCCGT337050.07.0337955
TCGCGGC349200.07.00498620-24
GGGGATC1472550.06.74548052
CGGAAGA1086900.06.53059673
TCGCGCT174700.06.39093075
GCCATAC1333750.06.35476973
GATCCGG261400.05.76891335
Produced by FastQC (version 0.11.5)