FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754224

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754224
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences327534222
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGCCCG832550.011.0160765
GGATCCG399700.010.6116064
TATCGCG213050.010.18151920-24
AGCGTCG791850.08.2860869
GTATGGC1340500.07.2875192
ATCGCGG310800.07.07729120-24
CTAGTAC1131100.07.0699819
GGCCCGG1391000.06.7236946
GAGCGTC1067050.06.4004658
GATCCGT360250.06.2589745
CCGGGGG1510650.06.0615449
GCCCGGG1555100.06.04214767
GCCATAC1334450.06.02704143
CCCGGGG1559900.05.9399058
TCGCGGC393400.05.823515420-24
TATGGCC1796450.05.67603543
ATCGGAA1243750.05.6619741
GGGGATC1583550.05.6469012
ATGGCCC1902400.05.3661184
GTACTGG1948200.05.222831
Produced by FastQC (version 0.11.5)