FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754225

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754225
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences360725162
Sequences flagged as poor quality0
Sequence length151
%GC39

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATCGCG188150.012.26888120-24
TGGCCCG699700.012.1955665
GGATCCG370600.010.1726784
ATCGCGG242800.09.61486720-24
CCGGGGG922950.09.4732469
GGCCCGG1045900.08.4983566
ATCGGAA818300.08.2226491
TCGCGGC316350.07.755320-24
CCCGGGG1170900.07.73965938
TCGGAAG889400.07.48352532
GCCCGGG1193200.07.4735267
TCCGGCG165950.06.85892537
TCGCGCT151150.06.47534665
GTATGGC1463300.06.43134742
CTAGTAC1238950.06.17345579
CGGAAGA1107800.06.1586713
GCTCGCG191250.05.5349053
GGGGATC1466300.05.50342462
GATCCGT326950.05.36625585
GTACTGG2124000.05.31850051
Produced by FastQC (version 0.11.5)