FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754226

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754226
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences360725162
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGCCCG756900.012.4044855
TATCGCG185300.010.07863620-24
GGATCCG400400.09.6152924
AGCGTCG642250.09.5162639
GGCCCGG1210350.07.93688876
CCGGGGG1235450.07.5291249
GTATGGC1455600.07.1148582
ATCGCGG270200.07.067433420-24
GAGCGTC907550.07.02204048
CCCGGGG1368100.06.94752078
GCCCGGG1396250.06.91129977
TCCGATC263050.06.6443963
GATCCGT349850.05.98912575
TCGCGGC334100.05.911013620-24
ATCGGAA1147000.05.70331571
TATGGCC1930600.05.649793
ATGGCCC1970650.05.4746384
TCGGAAG1240000.05.31645632
CTAGTAC1245250.05.2923719
AGAGCGT1267800.05.19825947
Produced by FastQC (version 0.11.5)