FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754230

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754230
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences402493934
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC343050.021.574573
CCGATCT466800.015.9938394
TTCCGAT538200.013.8323112
CTTCCGA683550.011.3359521
CGATCTA289100.08.7004485
TATCGCG151350.07.098335320-24
GGATCCG383800.06.95007044
Produced by FastQC (version 0.11.5)