FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754233

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754233
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences360468209
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1253500.012.5922121
TCGGAAG1365650.011.4724742
CGGAAGA1500150.010.5518373
TGGCCCG745750.010.273465
TATCGCG117450.08.24530630-34
GGCCCGG1177800.06.68946846
GTATGGC1466050.05.85571342
GCCCGGG1415450.05.79164177
CCGGGGG1367600.05.64978939
ATCGCGG182150.05.61103930-34
TATGCCG659650.05.480916545-49
GGATCCG342800.05.22381644
CTCGTAT651550.05.044006340-44
Produced by FastQC (version 0.11.5)