FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754238

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754238
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences407849371
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGATCCG403850.011.2739094
TATCGCG196800.09.14394230-34
TCCGATC308050.08.1904253
GATCCGT392450.08.1098525
CTAGTAC1416500.07.06329159
GGGGATC1761100.06.29879672
GCCATAC1664500.06.0632273
CCGATCT430300.06.0149474
ATCGCGG308200.06.012913730-34
GGGATCC2126700.05.4989093
TCGCGGC362600.05.374559435-39
TACTAGT2095750.05.16492137
TTCCGAT531100.05.1192362
ACTAGTA2143700.05.07308248
CCGTATA416850.05.0264668
Produced by FastQC (version 0.11.5)