FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754242

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754242
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences375296131
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGCGC992600.08.4250511
GGATCCG368250.08.2306354
TATCGCG150100.07.24295320-24
ATAGCCG348400.06.4127672
ACCGTGC1107000.05.9045781
GATCCGT346700.05.70688965
CTCACGC3129600.05.6533893
GCTCACG3181950.05.5830092
CCGCGCC1562200.05.55815172
CCTTCGT1375700.05.4446491
ACTGCGC1045500.05.38201431
CGCGATC630850.05.1839213
ACCGCAC1028650.05.04607441
Produced by FastQC (version 0.11.5)