EGAF00005754687 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005754687
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1114167
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	1951	0.17510839936921485	No Hit
GGTGTACACCCTGCCCCCATCCCGGGAGGAGATGACCAAGAACCAGGTCAGCCTGACCTGCCTGGTCAAAGGCTT	1910	0.17142852014105606	No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT	1459	0.13094984863130932	No Hit
GTACAACAGCACGTACCGTGTGGTCAGCGTCCTCACCGTCCTGCACCAGG	1383	0.1241286090864296	No Hit
GTCCGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCA	1380	0.12385934963071066	No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCAGAC	1351	0.12125650822542759	No Hit
GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGCCTCCACCAAGGGCCCATCGGTCTTCCCC	1239	0.11120415521192065	No Hit
AGCTGGTACAGTCCGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACA	1224	0.10985785793332598	No Hit
GCCCAGGGCCGCTGTGCCCCCAGAGGTGCTCTTGGAGGAGGGTGCCAGGG	1213	0.10887057326235655	No Hit
GTATGTAGACGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC	1157	0.10384439675560307	No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA	1131	0.10151081480603895	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGCTA	20	0.0065497956	53.296974	63
GTATCAA	1890	0.0	38.845875	1
GGTATCA	865	0.0	38.472336	1
TCGTATG	145	0.0	35.807526	40
TATCAAC	2065	0.0	35.373417	2
CGTACTA	160	0.0	34.350986	29
CAACGCA	2205	0.0	33.127487	5
ATCAACG	2205	0.0	33.127487	3
AACGCAG	2290	0.0	32.347126	6
ACTAGAT	160	0.0	32.260605	32
TCAACGC	2280	0.0	32.037766	4
GTACTAG	175	0.0	31.419325	30
CTAGATC	145	0.0	30.86681	33
GTGGTAT	275	0.0	29.941355	1
CGTATGC	175	0.0	29.687922	41
CAGAGTA	2485	0.0	28.982101	10
CGCAGAG	2555	0.0	28.723696	8
TATAAGA	360	0.0	28.578289	2
AGAGTAC	2510	0.0	28.556797	11
CTCGTAT	160	1.8189894E-12	28.112368	39