EGAF00005754688 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005754688
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1114167
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGTGTACACCCTGCCCCCATCCCGGGAGGAGATGACCAAGAACCAGGTCAGCCTGACCTGCCTGGTCAAAGGCTT	1990	0.17860877229356104	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	1876	0.16837691297624144	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1738	0.15599097801317038	No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCAGAC	1472	0.13211663960609135	No Hit
GTACAACAGCACGTACCGTGTGGTCAGCGTCCTCACCGTCCTGCACCAGG	1251	0.1122811930347964	No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT	1247	0.11192218042717116	No Hit
GTCCGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCA	1235	0.1108451426042954	No Hit
AGCTGGTACAGTCCGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACA	1186	0.10644723816088611	No Hit
GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGCCTCCACCAAGGGCCCATCGGTCTTCCCC	1170	0.10501118773038512	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1760	0.0	36.76773	1
GTGGTAT	310	0.0	35.34321	1
GGTATCA	805	0.0	34.026066	1
TATCAAC	1930	0.0	33.34274	2
ATCAACG	2065	0.0	31.161547	3
CTCGTAT	45	0.004797746	30.434427	1
CAACGCA	2150	0.0	29.929579	5
TCAACGC	2155	0.0	29.860136	4
AACGCAG	2195	0.0	29.471926	6
TTAGGTA	90	0.0067202374	28.404448	70
AGAGTAC	2270	0.0	28.223213	11
CGCAGAG	2355	0.0	27.489325	8
CAGAGTA	2380	0.0	27.06273	10
TGGTATC	450	0.0	26.622955	2
GTGTATA	275	0.0	26.14594	1
ACGCAGA	2630	0.0	24.477032	7
TACTGTC	85	1.5187226E-4	24.170687	7
TGTATAA	270	0.0	24.087435	2
TTCGGGG	805	0.0	23.817392	70
AGTACGG	2235	0.0	23.300045	13