FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005754734

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754734
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences202
Sequences flagged as poor quality0
Sequence length26-76
%GC80

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10853.46534653465347No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG31.4851485148514851No Hit
GTGTATAAGAGACAGGATGCAGACAGGGAGGATGGAGACTGGGTCATCTGGATGTCACATCTGGCACCTCGGAGC10.49504950495049505No Hit
GGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTATTGTGCAA10.49504950495049505No Hit
GACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACAT10.49504950495049505No Hit
CCTCAGAGGAGGGCGGGAACAGAGTGACCGAGGGGGCAGCCTTGGGCTGACCCAGGACGATCAGTTTGGTCCCTC10.49504950495049505No Hit
TCCGAGAAGACTGCTCCCCGGACGAGTTCATCGATGTGATCGTGGGCAAC10.49504950495049505No Hit
GGGTGATGAGGTGCGTATTCCACCGGTTCGCGTT10.49504950495049505No Hit
GTAGAAGTCACTTATGAGACACACCAGTGTGGCCTTGTTGGCTTGAAGCT10.49504950495049505No Hit
CTCCCATCCTTTGGCCTCTGACCCTTTTTCCACAGGGGACCTACCCCTATTGCGGTCCTCCAGCTCA10.49504950495049505No Hit
ACAGGGAAGGACCCACAGCAGATTCCAAAACTCTTTCATTCACTTGAGTTAACTGAAATGGCTCCTTCTTTGAGT10.49504950495049505No Hit
CTCGTATCAACGCAGAGTACGGTAGGAACTGCTCAGTTAGGACCCAGACGGAACCATCTAAGCCCCAGCTCAG10.49504950495049505No Hit
CACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACC10.49504950495049505No Hit
ATACACATCATACTCAAAAAAATCAAACCCTAATATACAAAACTAAAGTC10.49504950495049505No Hit
CTTATACACATCTGACGCTGCCGACGACGGAGAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAAAAAAA10.49504950495049505Illumina Single End PCR Primer 1 (100% over 32bp)
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTTATTTAATT10.49504950495049505No Hit
CACCAGTGTGGCCTTGTTGGCTTGAAGCTCCTCAGAGGAGGGCGGGAACAGAGTGACCGAGGGGGCAGCCTTGGG10.49504950495049505No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.49504950495049505No Hit
GTGTATTACTGTGCGATGCGCAGCAGGTTTTGGGTGAGGGGTAGACAGTG10.49504950495049505No Hit
CCTTTCACCGGAGGGTTTCGCTTTACGGGAGTCTGCTCCTTCCAGGACGCGACGAAGTTTTCATAAGCCTTCTCG10.49504950495049505No Hit
GGGTGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGTG10.49504950495049505No Hit
ACGGTGATGTTTTTGGCGCCTTCCAGGGCATCGGAAAACTGCTTGACCTGAGCCGACTCCAGGGCGGGCACACC10.49504950495049505No Hit
GCGTCGGCTATTTCCTGCGAGAGGAGGTTCCGTGAGCATCCGGCACCCGCGCTCGCTCAAATGGCGTCTCGTCAC10.49504950495049505No Hit
GTGTCCGAGGTTGAATCATTTATTTTGGACCAAGAAGATCTGGATAACCC10.49504950495049505No Hit
GGTATCAACGCAGAGTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10.49504950495049505No Hit
CCCAGAGAGGCCAAAGTAAAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAG10.49504950495049505No Hit
CTCCATAGCCGACTGTGTGTTCTTCTATCCCAACAACTTTCTTGGGTTTGTACATGAAAAGGGTCACTCCAGCCA10.49504950495049505No Hit
TCAAAGAACAGACCAGCAAGTACAGCCCCTACACCCTCAACCCCACACCCCAGCTGATCAAATAAGACACCGA10.49504950495049505No Hit
ATCGAGGATCCCGTCGGCCTCCTTCGACATCGCCCAGAGATCGGCCGAGAGCTTGATGTCG10.49504950495049505No Hit
GATCCAGCCCATCCACTCGGGCCCTTGTCCAGGGGCCTGTCGCGCCCAGGGTAGAGGGTAGTCGCTGAAGGTG10.49504950495049505No Hit
GCGCATGCCACTCGTCGATCTTCGCCTCGTCGACGCTGGCTTCGGGCCAG10.49504950495049505No Hit
GTGAGATACCTATGCCACAGAATTCGACCTTGAAGCAGAAGACTAAGTCCACTTCCAAAAAGGGGATGATCACA10.49504950495049505No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC10.49504950495049505No Hit
ATAATCACCAACGTCACTGCTGGTTCCAGTGCAGGAGATGGTGATCGACT10.49504950495049505No Hit
CATTTATGGTGCATCCACTTTACAAGGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCA10.49504950495049505No Hit
TGACAAGAAGCACCACGATGCAGAGCACCACAGAGCTGAGAGGCCGGGCA10.49504950495049505No Hit
GTAGGACGGGGGTGAGGTGAAAGATTACCTGGAGGAACGCAATAGAGGTAGGTCCCCTGTTGAAAAACGGTCAGA10.49504950495049505No Hit
ACTGATGAATCGTCCTCGTGCTGCCACAGTTGTTGCTCGTGGCCCCTTGAAGTGCGTTAAGCTGGAC10.49504950495049505No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT10.49504950495049505No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT10.49504950495049505No Hit
GTATCAACGCAGAGTACGGGAGCTTCAGCTGTGGTAGAGAAGACAGGATTCAGGACAATCTCCAGCATGGCCGG10.49504950495049505No Hit
GCGGACTGGAGACTGAAGATTTTGCAGTGAAATACAGTCAGAAGTATGGT10.49504950495049505No Hit
GATACATACTTGGCAAATTTTTGAGTTTTACATTCTTACAGAAAAG10.49504950495049505No Hit
GAACTGGGGTGGATCGTCATTGCATAATATCAGGAGATGGAGGGAGGGTG10.49504950495049505No Hit
GAATCAGTCAGCTGCACATGATGTACGATCATTACTACCTTTCATGATCT10.49504950495049505No Hit
CGTCTGGGACCCCCGGACAGAGTGTCACAATCTATTGTTCTGGAAGCAGC10.49504950495049505No Hit
GCTCCTGGCCGCTTACAAGTTGTTACTTTGCTTGGAGCGTGTGGTGGTCTCCACTCCCGCCTTTACGGCG10.49504950495049505No Hit
GGATGGGAGGGGGTCAGGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCCCTGTTGAAG10.49504950495049505No Hit
CTTAGGAATACAGTTTCTAGCATTAAACAAATAAACAAGGGGAGAAAATA10.49504950495049505No Hit
GTATCAACGCAGAGTACGGGAGGTCTCAGAGAGGAGCCTTAGCCCTGGACTCCAAGGCCTTTCCACTTGGTGAT10.49504950495049505No Hit
GACACCCCACTGCCCCCCCCGCCCCCTAGCGCCGCCTCTAGCCCCAAGGTCCCCGCCGCCTTCCCCCAACCGCA10.49504950495049505No Hit
GAAGAAACGGCGGTCATCTCGCAGCGAACTGAGCAGGCGCGCCGGATCCTGGAGATATTGCCGTTCGACGGAC10.49504950495049505No Hit
CAATCAACCCTTAGAACAAATTAATATTTTTTATTTAAATATTTTGAAAGTAGTAAGTTGAAAAATATTCAGG10.49504950495049505No Hit
CTGCTCCTCAGTTCCAGCCTGACCCCCTCCCATCCTTTGGCCTCTGACCC10.49504950495049505No Hit
GCCTTGGGCTGACAGAGGACGATCAGTTTGGTCCCTCCGCCGAACACCCAAGTAGTTAGACAGACATCCAAT10.49504950495049505No Hit
GACACATAGCAATTCAGGAAATTTGACTTTCCATTCTCTGCTGGATGACGTGAGTAAACCTGAATCTTTGGAGTA10.49504950495049505No Hit
CCGCCACCTGGCTGCTCACCAGGCGCGTGCTCCCGGCGCTGGGCATCGGA10.49504950495049505No Hit
ATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATTCAGCA10.49504950495049505No Hit
TGTGTGAGTTTTGTCACAAGATTTGGGCTCAACTCTCTTGTCCACCTTGG10.49504950495049505No Hit
GTCGAAGGTGGATAACGCCCTCAAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCA10.49504950495049505No Hit
CCTGTACCTGAACTTCTTCCTTCTCCTGGTGGCAGCTCCCAGATGGGTCC10.49504950495049505No Hit
GGCGTCGGCTGTGGGGGTCTGGTGGGGGGCTGTGGTCGGCGTGAGGGTGG10.49504950495049505No Hit
GCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGT10.49504950495049505No Hit
CTCCAGAGACAACTCCAACAACTCACTGTCTCTGCAAATCAATAGCCTGAGCGCCGAGGACACGGCTGTGTATTA10.49504950495049505No Hit
CTTGCAAAGGATGTTCAAACAATATATGCTCACCTAGAAATTCTGCTGGGAAGGCACAGGAAAAAGGAGTATGT10.49504950495049505No Hit
GAACAGCGATCGTGGAAGCCCATGCCGAATATGGCCGGATCGCCAAGCGCTTCGGGGC10.49504950495049505No Hit
CTGCTATCCATACTAATTAAACTAATTGCTTAAAACATAGCTCTTTATAT10.49504950495049505No Hit
GTGGCGGCTCGATCACCCACCGCTTCTCCGACAATGTGAAGCTCAGCCTCAAGGCGCGC10.49504950495049505No Hit
GTTACTGCAAAATCTCTCTTCATCATCCCGACATCTTATAAAAATATGAAATCTCCAACTCCATATATTGTGTGC10.49504950495049505No Hit
TAGCTGCGCCCATCGACCGTGATGCCCTGCAGCAGCGCGCCGAGGGCGATGCCTTGCGCGAAGGT10.49504950495049505No Hit
CTACTAAGAACCCAGTCCAGAAAGTCTTCGAACAATCTGCTAATAAGATGTCTGATAATGATGATAAAGTTCTT10.49504950495049505No Hit
ATCCTGCAGCTCTAGTCTCCCGTGGTGGGGGGTGAGGGTTGAGAACCTAT10.49504950495049505No Hit
GATAGTGGTCAACTTTCTATCCAGGCAGAGTAAACTAAGGAGAGCTATGA10.49504950495049505No Hit
ACATAAACGACTGCAAGAGTTCTCGGTCTCTGACATGAAAAAATTTTCGC10.49504950495049505No Hit
CCAAACAACACCCCTCCTAAAACTAAAAACCAGACTCCTAAACCTAACAAACAAAACAAGCAAAACCCACTTAAA10.49504950495049505No Hit
GTCTTATTGAAGTTAAAACAGATGAGTTTCCTCGCCATGGGAGCAACATA10.49504950495049505No Hit
GCCTGTAATCGCGGCGCTTTGGGGGGGGGAGGTGGGGGGGTCACGTGCGGGGAGGGGTTGGCGGCCGGGGGGGG10.49504950495049505No Hit
TGGGAGGAGAGACCCCTCCCCTGGGATCCTGCAGCTCTAGTCTCCCGTGG10.49504950495049505No Hit
CCAAGGGCCCATCGGTCTTCCCCCTGGCACCCTCCTCCAAGAGCACCTCTGGGGGCACCGCGGCCCTGGGCTGC10.49504950495049505No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.49504950495049505No Hit
GGCCTGCACCTTGAGGCTCTGAATGGAGTGGGGTCGGGCGGGGAGCCGGGCCCCCAGGTCGCGGTAGCACTGGG10.49504950495049505No Hit
ACCCTTCCCTCCATCGGCGTCCCCCTGCTATTGTGGTACTCCAGCAAGAG10.49504950495049505No Hit
CTTATACACATCTGACGCTGCCGACGACGGAGAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAAAAAAAAAG10.49504950495049505Illumina Single End PCR Primer 1 (100% over 32bp)
CTTGAAGGTGGCTCCTCAACACTTCCACATTTCTCCCACTGGCCAGAACTTAGTTACGGGGCTATCCCCCAGCCA10.49504950495049505No Hit
GAGTACGAGGCATAGTTCGTGGCTCGAGGCGATGCGACCACCAGCAGGAT10.49504950495049505No Hit
CATTTAAAATGGTATCAGAAGAAACCAGGGAAATCCACTAAGATCATGATCTATTATGCATCCAGTTTGCAAA10.49504950495049505No Hit
CTGCTTGCCGCGCTGAATCACCACGAAACTGCACTGCGCGTTACCGCAGAACGCGCCATGAATAC10.49504950495049505No Hit
GTCTCAGCCTGTCTCCACCGGAGAGG10.49504950495049505No Hit
GTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTC10.49504950495049505No Hit
CCTCAGGGCCCCAGATCAAGGAGCTAACTGATGAAGAGGCAGAGAGGCTG10.49504950495049505No Hit
GGGGGGCGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.49504950495049505No Hit
ATCTCTGGTGCGCATCACGTTCACCAGATGGCTGAACATTATGGTGTTCCGGTTATCCTGCACAC10.49504950495049505No Hit
CTGAGAGGACCATTGCGAAGCGGCTCGTCTTGCGGCGGGATCCCTCGGTGAAGAGGACTCTCTGTCGAGGCTGCT10.49504950495049505No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers