EGAF00005754747 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005754747
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	577969
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGATACACGGCCGTGTCTGCGGCGGTCACAGAGGTCAGCTTCAGTGAGAACTGGTTCTTGGACTTGTCTACGGA	1044	0.18063252527384688	No Hit
GATTATCACTGTGCAGCATGGGATGACAGCCTGAGTGGTCCGGTGTTCGG	1038	0.1795944073125029	No Hit
CCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGT	870	0.15052710439487238	No Hit
GTCTCTGGTGGCTCCATCAGCAGTCCTAGTTACTACTGGACCTGGATTCG	814	0.14083800342232888	No Hit
GCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGC	793	0.13720459055762507	No Hit
GTGATAATCAGCTTCATCCTCGGACCGGAGCCCACTGATGGCCAGGGAGG	772	0.13357117769292123	No Hit
GACTTAGGACGGTCAGCTTGGTCCCTCCGCCGAACACCGGACCACTCAGG	772	0.13357117769292123	No Hit
GTGTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCTATCTGCCTTCCAG	726	0.12561227332261765	No Hit
GTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGAGACCCCTCCCCTGGGATCCTGCAGCTCTAGTCTCC	726	0.12561227332261765	No Hit
CTTCATGCGTGACCTGGCAGCTGTAGCTTCTGTGGGACTTCCACTGCTCAGGCGTCAGGCTCAGGTAGCTGCTGG	709	0.12267093909880979	No Hit
GTGCAGCATGGGATGACAGCCTGAGTGGTCCGGTGTTCGGCGGAGGGACC	667	0.11540411336940218	No Hit
GTCCTAAGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTC	664	0.11488505438873019	No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT	645	0.11159768084447436	No Hit
GTGCTCCCTTCATGCGTGACCTGGCAGCTGTAGCTTCTGTGGGACTTCCACTGCTCAGGCGTCAGGCTCAGGTAG	639	0.11055956288313042	No Hit
TCCTAAGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGG	620	0.10727218933887459	No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCC	608	0.10519595341618668	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATAAGG	30	6.350317E-4	45.93886	2
GGTATCA	380	0.0	38.990963	1
GTATCAA	870	0.0	38.02166	1
TATCAAC	975	0.0	34.27746	2
TCAACGC	1055	0.0	31.025064	4
CAACGCA	1090	0.0	30.028845	5
AACGCAG	1105	0.0	29.621212	6
GTGTTAT	60	5.458476E-4	28.714273	1
CTACGGA	355	0.0	28.615614	69
GTGGTAT	170	0.0	28.376457	1
AGAGTAC	1150	0.0	28.167395	11
CAGAGTA	1150	0.0	28.167395	10
AATGGTA	135	5.512528E-5	28.046658	70
GCAGAGT	1195	0.0	27.683437	9
GGACTAG	75	6.210662E-5	27.565702	1
TATACAC	50	0.0077821263	27.56332	3
TATAATG	50	0.0077821263	27.56332	2
CGCAGAG	1195	0.0	27.395067	8
ACGCAGA	1215	0.0	26.94179	7
TTAATCG	90	6.798471E-6	26.883724	37