FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005754856

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754856
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1010611
Sequences flagged as poor quality0
Sequence length20-76
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG15950.15782531557641863No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTACCCTAACCGTGCAAAGGTAGCATAAT14880.1472376611772482No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCGTTGAACAAACGAACCTTTAATAGCGGCTGCAC13840.13694685690141903No Hit
AGCATGCACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGA12590.12457810176220128No Hit
GTGCATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT12560.12428125163886006No Hit
GTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTAACCAGTGA12410.12279700102215392No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)