FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005754961

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754961
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences503837
Sequences flagged as poor quality0
Sequence length20-76
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCAGTGACAGTCGGGGGTGGCAGCATGAGGGAGATGGGGTAGGTGGAG10750.21336265498564022No Hit
TCCCTGGACCTTGCCGGACCCAGTCCATGGCATAATCATCAAAGGTGAAT9470.1879576132757221No Hit
GTCCAGGGAAGGGCCTGGAGTGGGTCGCAGGTATTAGTTGGAACAGCGGT9010.1788276764112203No Hit
GTCACTGCACCGACCGGCCCTCGAGGACCTGCTCTTAGGTTCAGAAGCGAACCTCACGTGCACACTGACCGGC8370.16612515555626126No Hit
CTCCAGGCCCTTCCCTGGACCTTGCCGGACCCAGTCCATGGCATAATCATCAAAGGTGAATCCAGAGGCTGCACA7920.15719369558011817No Hit
GTATGCTGGTCACAGCGAAGGTGGTGGTGCCCTGGCTGGGCTCCTGCCGG7150.1419109751764956No Hit
GTGTGACCTGGAGCGAAAGCGGACAGGGCGTGACCGCCAGAAACTTCCCACCCAGCCAGGATGCCTCCGGGGAC7110.14111706762306062No Hit
GTGTGCACGTGAGGTTCGCTTCTGAACCTAAGAGCAGGTCCTCGAGGGCC7100.1409185907347019No Hit
GTCACATCCTGGCTGGGATTCGTGTAGTGCTTCACGTGGCATGTCACGGA6900.13694905296752719No Hit
CGTGCACACTGACCGGCCTGAGAGATGCCTCAGGTGTCACCTTCACCTGGACGCCCTCAAGTGGGAAGAGCG6860.13615514541409224No Hit
AGGTCACACTGAGTGGCTCCTGGGGGAAGAAGCCCTGGACCAGGCAGGCG6190.122857193894057No Hit
GCACTGAACACAGAGGACTCACCATGGAGTTGGGGCTGAGCTGGATTTTC6100.1210709018988284No Hit
GTCCAGGGCTTCTTCCCCCAGGAGCCACTCAGTGTGACCTGGAGCGAAAGCGGACAGGGCGTGACCGCCAGAAA5970.11849070235016483No Hit
GTTCAAGGACCACCTGAGCGTGACCTCTGTGGCTGCTACAGCGTGTCCAG5960.11829222546180611No Hit
GCCCCAAGGTCTTCCCGCTGAGCCTCTGCAGCACCCAGCCAGATGGGAAC5900.11710136413165369No Hit
GTGTACAGGTCCCCGGAGGCATCCTGGCTGGGTGGGAAGTTTCTGGCGGT5810.11531507213642508No Hit
ATACAAGGCCGTGTCCTCAGCTCTCAGACTGTTCATTTGCAGATACAGGG5640.11194096503432659No Hit
GATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGGCTGAGCTGGA5420.10757447349043439No Hit
GTGCCTAGCCGGCAAGTCCGTGACATGCCACGTGAAGCACTACACGAATCCCAGCCAGGATGTGACTGTGCCCTG5060.10042930550951995No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)