FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005754962

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754962
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences503837
Sequences flagged as poor quality0
Sequence length20-76
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCCTGGACCTTGCCGGACCCAGTCCATGGCATAATCATCAAAGGTGAAT9110.18081244529480767No Hit
GTGTGACCTGGAGCGAAAGCGGACAGGGCGTGACCGCCAGAAACTTCCCACCCAGCCAGGATGCCTCCGGGGAC9060.17982006085301397No Hit
GTGCAGTGACAGTCGGGGGTGGCAGCATGAGGGAGATGGGGTAGGTGGAG8210.1629495253425215No Hit
CTCCAGGCCCTTCCCTGGACCTTGCCGGACCCAGTCCATGGCATAATCATCAAAGGTGAATCCAGAGGCTGCACA7990.1585830337986293No Hit
GTCACTGCACCGACCGGCCCTCGAGGACCTGCTCTTAGGTTCAGAAGCGAACCTCACGTGCACACTGACCGGC7640.1516363427060736No Hit
GTCCAGGGAAGGGCCTGGAGTGGGTCGCAGGTATTAGTTGGAACAGCGGT7630.15143786581771487No Hit
CGTGCACACTGACCGGCCTGAGAGATGCCTCAGGTGTCACCTTCACCTGGACGCCCTCAAGTGGGAAGAGCG7290.14468965161351788No Hit
GTTCAAGGACCACCTGAGCGTGACCTCTGTGGCTGCTACAGCGTGTCCAG6950.13794143740932088No Hit
GTCCAGGGCTTCTTCCCCCAGGAGCCACTCAGTGTGACCTGGAGCGAAAGCGGACAGGGCGTGACCGCCAGAAA6390.1268267316612317No Hit
GCACTGAACACAGAGGACTCACCATGGAGTTGGGGCTGAGCTGGATTTTC6240.12384957833585068No Hit
CTGCAGCACCCAGCCAGATGGGAACGTGGTCATCGCCTGCCTGGTCCAGG6000.11908613301524106No Hit
AGGTCACACTGAGTGGCTCCTGGGGGAAGAAGCCCTGGACCAGGCAGGCG5690.11293334947612024No Hit
GCCCCAAGGTCTTCCCGCTGAGCCTCTGCAGCACCCAGCCAGATGGGAAC5640.11194096503432659No Hit
GTGTACAGGTCCCCGGAGGCATCCTGGCTGGGTGGGAAGTTTCTGGCGGT5360.10638361216028198No Hit
ATACAAGGCCGTGTCCTCAGCTCTCAGACTGTTCATTTGCAGATACAGGG5350.10618513527192326No Hit
GTCCAAGACCCCGCTAACCGCCACCCTCTCAAAATCCGGAAACACATTCC5330.1057881814952058No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5270.1045973201650534No Hit
GTCACATCCTGGCTGGGATTCGTGTAGTGCTTCACGTGGCATGTCACGGA5220.10360493572325971No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)