EGAF00005755273 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005755273
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1313367
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	2096	0.15958981762142646	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	2079	0.15829543455865724	No Hit
CTCCAGACCCTTGCCTGGAGCCTGGCGGACCCAGTGCATGCCAAAACTAC	1745	0.13286461438425057	No Hit
GGTGTACACCCTGCCCCCATCCCGGGAGGAGATGACCAAGAACCAGGTCAGCCTGACCTGCCTGGTCAAAGGCTT	1677	0.12768708213317376	No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCAGAC	1673	0.12738252141252215	No Hit
GTCCCAACCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGG	1607	0.12235726952177113	No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC	1559	0.11870254087395223	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	1552	0.11816955961281195	No Hit
GTACAACAGCACGTACCGTGTGGTCAGCGTCCTCACCGTCCTGCACCAGG	1491	0.11352500862287539	No Hit
GTTTTGGCCAGGGGACCAAGTTGGACATCAAACGAACTGTGGCTGCACCA	1425	0.10849975673212439	No Hit
GTATGTAGACGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC	1353	0.10301766376039599	No Hit
GGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCC	1322	0.10065731817534627	No Hit
CTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCACCTCCAC	1319	0.10042889763485759	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2115	41.248077	1
TCGCTAA	175	37.50338	31
CGCTAAT	170	36.57729	32
TATCAAC	2465	35.390003	2
ATCAACG	2510	34.61815	3
TCAACGC	2530	34.344486	4
CAACGCA	2545	34.142063	5
TCGTATG	175	33.646767	40
AACGCAG	2620	33.164715	6
CGTATGC	200	31.19302	41
AGAGTAC	2810	31.166489	11
CGCAGAG	2855	30.433708	8
CTCGTAT	175	29.681513	39
ACGCAGA	2935	29.604172	7
CAGAGTA	2985	29.570322	10
GTGGTAT	390	28.292994	1
ACTCGCT	220	28.243801	29
AGTACGG	2575	27.854551	13
TATACAC	265	27.324387	3
GAGTACG	2650	27.063124	12