FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005755315

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005755315
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38
Sequences flagged as poor quality0
Sequence length56-76
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACTGCAGCTAATCTCGTATGCCGT37.894736842105263No Hit
GAGCAATGGGGAACGCTCACGGACTGTGTGGTAATGAGAGATCCAAACAC12.631578947368421No Hit
ACGTTATTTCACATAACAAACCGTCATGCACCAAGACTGTAAAAACCCCA12.631578947368421No Hit
CCTGAGGACTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGC12.631578947368421No Hit
GTCCTTGGGTTTTGGGGGGAAGAGGAAGACTGACGGTCCCCCCAGGAGTT12.631578947368421No Hit
GTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTGTCA12.631578947368421No Hit
CCATCAGGCATTGAAACGCCTCCACTTCTGGGCCCTAAGTGGGGGGCAGC12.631578947368421No Hit
GCTGCAGATTATCCATCGGGTGCGAAACTTTGGTGGCAAGGGCCAAGGCCGGTGGGAATTTCCCCCAAAAAA12.631578947368421No Hit
GTTCTCATCGTAGGGAGCAAGCTCTTTGTGCTTGGCCAGCTTGACGGTATCCACCCATTCGGGGACTTTCAGCTT12.631578947368421No Hit
ACCCGGGGACAGGGAGAGGCTCTTCTGCGTGTAGTGGTTGTGCAGAGCCTCATTCATCACGGAGCATGAGAAG12.631578947368421No Hit
CCCATAAACTTTAATTAGCAAGAATATACATAATCATAATATTAAAATCATAATCAAAACGAAATGCACCAT12.631578947368421No Hit
AGATAAGGGAGGGTCCCTGGAGAATCTCTGACCTGCCTCACAAGCTTTTG12.631578947368421No Hit
CAACAGCACGTACCGTGTGGTCAGCGTCCTCACCGTCCTGCACCAGGACTGGCTGAATGGCAAGGAGTACAAGTG12.631578947368421No Hit
TAATCAGTGGGTGGGAGGTGAGGCTGTGCAACGCACTGCAAGCGACCAGTTCCTCGGAGTACGCCGCGTGGCTCA12.631578947368421No Hit
ATCACAATATTGATGCCGAACTTAGTGCGGACACCCGATCGGCATAGCGC12.631578947368421No Hit
CTTCTGCGTGTAGTGGTTGTGCAGAGCCTCATGCATCACGGAGCATGAGAAGACGTTCCCCTGCTGCCACCTGCT12.631578947368421No Hit
CGCTATCCAGAACCTCCACTCTTTCGACCCCTTTGCTGATGCAAGTAAGGGTGATGACCTGCTTCCTGCTGGCA12.631578947368421No Hit
GACAGCTCCAGCGCTGCCCATTCCCCCGCGTCCTCCTCCCCGCCCACCTCTGCTCATGCCTCCACGATCAACTCC12.631578947368421No Hit
GTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCT12.631578947368421No Hit
GAGTCCATGATGTGCAGGTCGTCCTGGGCCAGCTTGACGGTCAGTGCCAC12.631578947368421No Hit
GACAGACTCTCAATATGTTGCCCAGACTGTTATCGAACTCCTTCACTCCC12.631578947368421No Hit
AGGCCACACTGGTGTGTCTCATAAGTGACTTCTAACCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCC12.631578947368421No Hit
GAAAGGCTACCATCACCGCACAGAGATCAACAAGAACATTTATAAGATACGCCAGGGCTACCTTATCAAGGACGG12.631578947368421No Hit
GTCTTAGAATGTACTGCTCGGAGGTTGGCTTCTGCTCCGAGGTCGCCCCA12.631578947368421No Hit
GGGCTGTGCGGGGCCGAGGACGCTTGCTTTTCCTTCCGGGCTCTACAGTGGCATCAATGTGGAGGGGTCATTC12.631578947368421No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGACGTCATCTCGTATGCCGT12.631578947368421No Hit
ATTGAGCTTGTCCCGAACTTTGCCTTTGGACCACTTCTTCTTTTTGGCCTTGCCCCCGGATTTGTTCACTGGGT12.631578947368421No Hit
GTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCACCTCCACGCCGTCCACGTACCAGTTGAACTTGAC12.631578947368421No Hit
GCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCATCAATATGGTGAC12.631578947368421No Hit
TAAAAAATCAGAGTAACTATGCCACATCAAATAAAAGAAGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAA12.631578947368421No Hit
TCCCCATTCATCACCCTGGAGCCTTCCCTCCTCTTCCCAGCAGGCCAGGGTTCTGT12.631578947368421No Hit
AGAGAGATGGAGGCCCAGACAGTGAGGGCAGGAGGGAGAGAACAGGCGCAGAAGCAGAGCCAGCGAGAGAGAAAG12.631578947368421No Hit
GCTCAGGCCCTGATGGGTGACTTCGCAGGCGTAGACTTTGTGTTTCTCGT12.631578947368421No Hit
CTGCGGCTCCCACCGCTCACACCAGAGGGATCGGCTAGGAGCCGCAGGCAGCCAGGCCACACAACTACTTTCCG12.631578947368421No Hit
ATCCAGGAGGCAGATGTTGCAGTGAGCCAAGATCCTGCCGCTGCACTCCAGTCTGGCGATAGAGCGAGA12.631578947368421No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGGGGTAAGCAATTTTAAGAAGAAGGGACA12.631578947368421No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)