FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005755316

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005755316
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38
Sequences flagged as poor quality0
Sequence length27-76
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG410.526315789473683No Hit
ATGCAGAACAAACACAACCCCTAGCAGAAAGATGGCGACACGAAGGACAAGAAGGACGAAGAGGAGAAAAACAGC12.631578947368421No Hit
GTGCTATCAACGCAGAGTACGGGTCATTATTTCCCTCACTGTCACCCCAACACAGGCAGGGTCATAAGGAAACG12.631578947368421No Hit
GTATCAACGCAGAGTACGGGCACTCCCAATTGTCCACTGCCTGTAGTCCCATCTACTATCGAAGCAGAGGTCCCA12.631578947368421No Hit
GACCCCTCCCCTGGGATCCTTCATCTCTAGTATCCCGTGGGGGGGGTGAG12.631578947368421No Hit
CTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTAC12.631578947368421No Hit
GGGACCTTGTTGTTGTTTTTTTTTAAAAAATTTAAAAAGGAGGCCAATATTAAAACACCAAGAAGAGAATTGAAG12.631578947368421No Hit
GGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACG12.631578947368421No Hit
GGGCACAGCGGCCCTGGGCTGCCTGGTCAAGGACTACTTCCCCGAACCGGTGACGGTGTCGTGGAACTCAGGCGC12.631578947368421No Hit
ATCTTGCCCAGTCAGCACTCCAGACCCTAATACCACGCCCGATCCCACTACTGCTCAGAACGGGAGTTTTGCC12.631578947368421No Hit
CAACACACACAAGCTGAAGACTTCTTGCTCATCCCTGCTGCATAAGGCTGAATTCCCTCTGGCTGCACCCCACT12.631578947368421No Hit
GTATAAACCAATAGTACTCGGGTCTACACAATGCAAAAATACATGGATTACAAGAACAAGAAACCCAGTCAATT12.631578947368421No Hit
TATGGGGGGGGGGGGCGGGGGGGTGTGGCGGGGGTGGGGGCGGGGGGGGGGGGGGGGGGGGGGGG12.631578947368421No Hit
CTGAAAATTGCATTGCAAATTCAAAATACATCAAACTAACTAAAAGAATA12.631578947368421No Hit
GTACCCCAAATACAGATGTAACAAGTCTTTTAGTCAC12.631578947368421No Hit
GAAAGAGGAGGAGTAAGAAAAGAGGGAAAAGCAAGGGAAAGTAAAGGAAG12.631578947368421No Hit
GAATAAAAGCAGTGTGGTCTGCCGACATGGAGGCCTATTAAATAATGATT12.631578947368421No Hit
AATAAATAGAAAAATATGTTCAAAGAAATACCATCCCTAACATTTTCAAATCCCACACATTAATCATTGGCAG12.631578947368421No Hit
CCTATGTGCAACCGAGCAGCTATGGACAGCAGAGTAGCTATGGTCAACAAAGCAGCTATGGGCAGCAGCCTCC12.631578947368421No Hit
GTGAACTTCATCATCGAGCGCGGAAAGAACATGAATGTCATGGCTGCCTGAAACAACAACCCCAACCCACAG12.631578947368421No Hit
TATCAACGCAGAGTACGGGGCCCTTTTAAATTCTGTGCAGACCATAGTGC12.631578947368421No Hit
GAGGACATGCACAGCCTTCAGCCAGCCATTCTCGCTGACATTACTGCAGGAACATGTTTTTGTGTCGTTGTTCCA12.631578947368421No Hit
ATAGGATTCTGGGTCCCAGAGTGAGTCTGGGAGGTGGAACCCTGTGAAAG12.631578947368421No Hit
CCTTATTCCTTAGCAAAACGGACAATCTTCAGTTGTCCCATGAATCCTTACTTCTCCTCCATGGTCTGTAAGCGG12.631578947368421No Hit
CCGCGAGAGCCCGGGGAGCGGGGGCTTGCCGGCCGTCGCACTCATTTACC12.631578947368421No Hit
AGGTCAGCCTGACCAGCCTGGTCAAAGGATTCAATCCCATCGACATAGCCGTGGAGTGGGAGAGCAATCGTCATA12.631578947368421No Hit
GTGGGGGGCCGGGGCGGGGCGGGGGGG12.631578947368421No Hit
ACAGAACCCTGGGCTGCTGGGAAGAGGAGGGAAGGCTCCAGGGTGATGAATGGGGA12.631578947368421No Hit
CTGTTCAAAATAATCTCTTAGGTGATGTTCTTCAGTGTCTTCTTTAATGC12.631578947368421No Hit
TCCGCTAACAATACATACAACACAGCTGGCACCCCCTTGTGGACAAATCCATTATGACTTTCCCAAAATCTCA12.631578947368421No Hit
AATATGACCACTACTGAATACACCTGAAACTTTTTTTTTTTTT12.631578947368421No Hit
ATCCCAGCGACATCGCCGTGGAGTGGGAGAGCAATGGGCAGCCGGAGAACAACTACAAGACCACGCCTCCCGTG12.631578947368421No Hit
ATCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCAGACCTACATCTG12.631578947368421No Hit
ATACAAGTCAGATTGAGCAGCATCTGTCAAGAGTTTCAGTCCCACTTGCAGAGGAAAGGCTCTCTGGCTTCGGT12.631578947368421No Hit
AAGAAAGACAAAGACCCAGTGAACAAATCCGGGGGCAAGGCCAAAAAGAA12.631578947368421No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)