EGAF00005755760 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005755760
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1261997
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGC	2238	0.1773379809936157	No Hit
CCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGT	1652	0.13090363923210596	No Hit
GTGTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCTATCTGCCTTCCAG	1647	0.13050744177680296	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1314	0.10412069125362422	No Hit
GCCTTGGGCTGACCTAGGACGGTCAGTTTGGTCCCTCCGCCGAATACCAGAAAAGTGTTGGTGCCCGCATATGAG	1304	0.10332829634301825	No Hit
GACCTAGGACGGTCAGTTTGGTCCCTCCGCCGAATACCAGAAAAGTGTTG	1278	0.10126806957544274	No Hit
GTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGAGACCCCTCCCCTGGGATCCTGCAGCTCTAGTCTCC	1277	0.10118883008438213	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2835	42.05234	1
GGTATCA	1080	40.517918	1
TATCAAC	3285	35.92712	2
TCAACGC	3300	35.71989	4
ATCAACG	3310	35.52504	3
CAACGCA	3400	34.56686	5
AACGCAG	3460	33.868114	6
ACGCAGA	3665	32.255013	7
AGAGTAC	3800	31.109108	11
GTGGTAT	410	31.094603	1
CAGAGTA	3885	30.340017	10
TGGTATC	420	30.312107	2
CGCAGAG	3900	30.223326	8
GCAGAGT	4135	28.422567	9
AGTACGG	3585	24.922804	13
TACGGGT	310	24.388828	15
GAGTACG	3710	24.083088	12
GAGTACT	1255	23.548727	12
AGTACTT	1245	23.185831	13
GTACTTT	1300	22.204891	14