EGAF00005755775 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005755775
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1415139
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	2907	0.20542151689692673	No Hit
GTATTACAGTGGTGGTAGATTCTAGTTATGATGCTTTTGACATCTGGGGCCAAGGGACAATGGTCACCGTCTCCT	2863	0.20231228169105647	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	2198	0.15532043142051769	No Hit
CTGTAATACCGTGCCTGTCTATCCACCTCGCACAGTAATAAACAGCCGTG	1981	0.13998624870065768	No Hit
GTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATT	1937	0.13687701349478743	No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC	1798	0.12705465682169736	No Hit
GTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCT	1791	0.126560005766218	No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC	1790	0.12648934132972095	No Hit
CAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATG	1765	0.12472273041729469	No Hit
GTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCA	1759	0.12429874379831238	No Hit
GGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCC	1656	0.11702030683911616	No Hit
CAATAGGGGTAGGTCCCCTGTGGAAAAAGGGTCAGAGGCCAAAGGATGGGAGGGGGTCAGGCTGGAACTGAGGAG	1641	0.11596034029166039	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	1537	0.1086112388959671	No Hit
GTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAG	1492	0.10543133925359982	No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCAGCCTGACCTGCCTGGTCAAAGGCTT	1450	0.1024634329207237	No Hit
GCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAAC	1442	0.10189811742874728	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGGAA	425	0.0	49.869553	70
GGTATCA	1430	0.0	41.3778	1
GTATCAA	3375	0.0	41.07771	1
TATCAAC	3910	0.0	35.545086	2
TCAACGC	3930	0.0	35.189125	4
ATCAACG	3970	0.0	34.92123	3
CGACCGG	70	0.0025580686	34.603363	70
CAACGCA	4015	0.0	34.44415	5
CTACGGA	430	0.0	33.46552	69
AACGCAG	4200	0.0	33.008873	6
ATACCGC	55	2.8874603E-4	32.014896	61
CTCGTAT	225	0.0	30.748438	39
CGCAGAG	4545	0.0	30.501095	8
AGAGTAC	4650	0.0	29.812359	11
CGTATGC	245	0.0	29.690367	41
ACGCAGA	4830	0.0	28.77256	7
GCAGAGT	4900	0.0	28.431723	9
GTATTAC	815	0.0	28.280828	1
CAGAGTA	4945	0.0	28.033867	10
ACCGTCT	825	0.0	27.615057	66