EGAF00005755776 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005755776
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1415139
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	2849	0.20132297958009776	No Hit
GTATTACAGTGGTGGTAGATTCTAGTTATGATGCTTTTGACATCTGGGGCCAAGGGACAATGGTCACCGTCTCCT	2767	0.19552849578733963	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	2097	0.14818332333431555	No Hit
CTGTAATACCGTGCCTGTCTATCCACCTCGCACAGTAATAAACAGCCGTG	1867	0.1319305029399939	No Hit
GTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATT	1854	0.1310118652655322	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	1805	0.12754930787717672	No Hit
CAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATG	1765	0.12472273041729469	No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC	1759	0.12429874379831238	No Hit
GTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCT	1757	0.1241574149253183	No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC	1671	0.11808027338657191	No Hit
GTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCA	1659	0.1172323001486073	No Hit
GGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCC	1598	0.11292176952228722	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	1590	0.1123564540303108	No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCAGCCTGACCTGCCTGGTCAAAGGCTT	1489	0.10521934594410866	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	1310	42.848812	1
GTATCAA	3500	42.40643	1
TATCAAC	3990	37.066364	2
TACGGAA	435	36.805183	70
ATCAACG	4045	36.44511	3
TCAACGC	4055	36.262802	4
CAACGCA	4080	36.03678	5
AACGCAG	4265	34.71528	6
AATACCG	440	34.35282	5
ATACCGT	450	34.352818	6
CGCAGAG	4575	32.58825	8
AGAGTAC	4590	32.332066	11
GTAATAC	515	30.693834	3
GCAGAGT	4880	30.62188	9
ACGCAGA	4860	30.606525	7
CAGAGTA	4960	29.920198	10
TCGCACA	570	27.76453	28
TAATACC	575	27.485168	4
AGTACGG	3920	27.429674	13
TGTAATA	620	27.182465	2