EGAF00005755831 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005755831
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	786974
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCCTGTGCTGGTCATTAATCAAGATAACAAGCGGCCCTCAGGGATCCCT	1038	0.13189762304726713	No Hit
CCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACA	1036	0.13164348504524928	No Hit
GACCTAGGACGGTCAGCTTGGTCCCTCCGCCGAACACCCAAAGGCTGGTGTCCCATGCCTGACAGTAATAGTCAG	1031	0.13100814004020464	No Hit
GCCTTGGGCTGACCTAGGACGGTCAGCTTGGTCCCTCCGCCGAACACCCA	1018	0.12935624302708856	No Hit
GCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGC	987	0.1254171039958118	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	899	0.11423503190702616	No Hit
GTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGAGACCCCTCCCCTGGGATCCTGCAGCTCTAGTCTCC	846	0.10750037485355297	No Hit
GTGTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCTATCTGCCTTCCAG	791	0.10051157979806195	No Hit
TCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGG	790	0.10038451079705303	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCAACG	2195	0.0	36.8079	3
TCAACGC	2215	0.0	36.631428	4
CAACGCA	2275	0.0	35.817093	5
GTATCAA	2335	0.0	35.783943	1
AACGCAG	2285	0.0	35.66034	6
ACGCAGA	2455	0.0	33.18888	7
AGAGTAC	2510	0.0	32.599182	11
CCGGTCG	85	1.1999873E-7	32.494	9
CAGAGTA	2530	0.0	32.477943	10
CGCAGAG	2555	0.0	32.025032	8
GTGGTAT	305	0.0	31.69698	1
TATCAAC	2640	0.0	31.388243	2
GCAGAGT	2620	0.0	31.36229	9
CAATACG	45	0.0046055475	30.68878	15
AGTACGG	2220	0.0	28.459696	13
GAGTACG	2275	0.0	27.771658	12
GTCGTAA	75	6.1309125E-5	27.619898	20
GTCGTAG	90	6.8605623E-6	26.85439	1
ACGTCCG	65	8.403104E-4	26.672834	43
GTCGTGT	80	9.511357E-5	25.893656	12