EGAF00005755899 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005755899
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2371029
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTAATAGACAGCCGTGTCTGCGGCGGTCACAGATTTCAGCTTCAGGGAGA	8011	0.3378701821023699	No Hit
ACTATAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC	5347	0.22551390134831753	No Hit
GTCTCTGGTGGCTCCATCACCAGTAGTTCTTACTACTGGGCCTGGATCCG	4990	0.210457147508529	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3608	0.15217021807831116	No Hit
GTCTATTACTGTGCGAGACAGTCCGGGGGGTATCTTCACTTCTACTACTA	3587	0.15128452667597064	No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT	3525	0.14866962825001295	No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCAGAC	3484	0.1469404212263958	No Hit
GTACAACAGCACGTACCGTGTGGTCAGCGTCCTCACCGTCCTGCACCAGG	3074	0.1296483509902241	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	2904	0.12247846820937237	No Hit
GTATCAACGCAGAGTACGGGATGCTTTCTGAGAGTCATGGATCTCATGTGCAAGAAAATGAAGCACCTGTGGTT	2887	0.1217614799312872	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	2843	0.11990574556447854	No Hit
GTATGTACAGGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC	2815	0.11872482369469121	No Hit
GTCTCGCACAGTAATAGACAGCCGTGTCTGCGGCGGTCACAGATTTCAGC	2762	0.11648950729830802	No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCAGCCTGACCTGCCTGGTCAAAGGCTT	2725	0.1149290033989462	No Hit
GTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCA	2679	0.11298891747000986	No Hit
GCCCAGGGCCGCTGTGCCCCCAGAGGTGCTCTTGGAGGAGGGTGCCAGGG	2650	0.1117658198191587	No Hit
CACTTGCACTGTCTCTGGTGGCTCCATCACCAGTAGTTCTTACTACTGGG	2559	0.10792782374234983	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGGAT	2185	58.911663	70
GGTATCA	3720	45.3815	1
CTACGGA	2260	39.090355	69
GTATCAA	8645	38.05959	1
GTGGTAT	1355	36.614147	1
TATCAAC	9550	34.23716	2
TGGTATC	1440	34.21436	2
GACGTGT	2315	32.52838	62
TCTACGG	2420	32.497044	68
ACGTGTC	2340	32.07451	63
ATCAACG	10335	31.903355	3
TCAACGC	10370	31.795677	4
GTGTCTA	2420	31.149311	65
CAACGCA	10655	31.07455	5
TGTCTAC	2430	30.946789	66
AACGCAG	10785	30.699982	6
TCGGACG	2625	28.608408	59
CGGACGT	2645	28.415787	60
CGCAGAG	11835	28.084436	8
AGAGTAC	11905	27.918715	11