EGAF00005755999 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005755999
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1536426
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	2654	0.1727385503760025	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1984	0.12913085303164618	No Hit
GTCTGGGACAGACTTCAGTCTCACCATCAGCAGTCTGCAACCTGAAGATT	1947	0.12672266676039068	No Hit
GTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGG	1758	0.11442139094235582	No Hit
CAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATG	1754	0.1141610464805985	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	1703	0.11084165459319226	No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC	1665	0.10836838220649743	No Hit
CTATATACACTGGGTGCGACAGGCCCCTGGACGCGGGCTTGAATGGGTGGGATTAATGAACCCAAGTGGTGGTAG	1620	0.1054395070117272	No Hit
AGTCAGAACATTGCCACCTTTTTAAATTGGTATCGGCAGAAACCAGGGAGAGCCCCTGACCTCCTGATCTATG	1582	0.10296623462503238	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTGGTAT	705	0.0	41.974262	1
GGTATCA	2185	0.0	40.78703	1
GTATCAA	5435	0.0	40.6452	1
CTACGCT	245	0.0	36.546745	28
TATCAAC	6150	0.0	35.749603	2
ATCAACG	6610	0.0	33.31378	3
TCAACGC	6655	0.0	33.088524	4
ACTACGC	275	0.0	32.552402	27
CAACGCA	6815	0.0	32.51363	5
AACGCAG	6895	0.0	32.136387	6
CGCAGAG	7500	0.0	29.493378	8
ACGCAGA	7500	0.0	29.448467	7
AGAGTAC	7685	0.0	28.783386	11
CAGAGTA	7975	0.0	27.779856	10
TACGCTG	325	0.0	27.556908	29
AGTACGG	5180	0.0	24.904411	13
CTATATA	625	0.0	24.774576	1
CCGTTAA	70	0.0013557362	24.574753	16
GAGTACG	5310	0.0	24.424273	12
CCCACGA	410	0.0	24.337376	19