EGAF00005756035 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005756035
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1015269
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6340	0.6244650432545463	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3190	0.31420244289936955	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1327	0.13070427640359353	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1325	0.1305072842763839	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1245	0.12262759918799845	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1105	0.10883815028332393	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1037	0.10214041795819631	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTGGTAT	905	43.999687	1
GGTATCA	3405	42.97973	1
TGGTATC	985	41.46267	2
GTATCAA	9045	40.637547	1
TATCTCG	190	39.79394	36
TATCAAC	10220	36.098625	2
CTTATAC	670	35.557854	1
ACCGATC	610	34.65334	27
ACGAGAC	615	34.33094	22
TATCGCG	185	33.438644	36
AGACCGA	640	33.01267	25
CCCACGA	650	32.9965	19
TCAACGC	11185	32.984173	4
ATCAACG	11225	32.896954	3
GACCGAT	645	32.76322	26
CAACGCA	11485	32.12259	5
AACGCAG	11645	31.71046	6
GAGACCG	680	31.063087	24
ATCTCCG	730	30.759808	10
CCACGAG	700	30.157722	20