EGAF00005756201 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005756201
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	151375
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	567	0.3745664739884393	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	408	0.2695293146160198	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	280	0.18497109826589594	No Hit
GTATCAACGCAGAGTACGGGAATATTAACCCGTTGTCCATCCACTACCCCTTTCGGGTTCGCGTTAGGCCCCGA	260	0.1717588769611891	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	244	0.1611890999174236	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	236	0.15590421139554086	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	198	0.13080099091659786	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	188	0.12419488026424444	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	184	0.12155243600330305	No Hit
GTATCAACGCAGAGTACGGGCTGTATAAATCGCTTTTCTTGGAAGCGGGT	163	0.10767960363336085	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGTACG	30	1.5998921E-7	65.577324	1
TGAGATC	20	0.005251021	56.33147	59
GTGGTAT	330	0.0	55.64137	1
TCGCGTC	20	0.0056973374	55.182705	52
TTCGATC	20	0.006065477	54.316696	47
TGGCGGG	35	1.8121782E-5	51.169933	45
GCTACCG	20	0.0081018815	50.484314	34
CTTATAC	175	0.0	44.96731	1
TGGTATC	410	0.0	44.78452	2
AGGGGGG	185	0.0	43.98808	70
GGAAAGT	30	8.0998073E-4	43.703777	19
GGTATCA	1270	0.0	42.083088	1
TATGGCG	35	0.0012265819	40.1674	42
TATACAC	210	0.0	37.472763	3
AGGTATC	45	1.3456753E-4	36.43185	2
GTATCAA	3005	0.0	36.334858	1
TATCAAC	3380	0.0	32.497643	2
GCGGGTT	45	0.00363645	32.18767	47
GGCGGGT	45	0.003741694	32.00081	46
TACACAT	260	0.0	30.26646	5