EGAF00005756432 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005756432
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2095457
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	4473	0.21346178900354434	No Hit
CTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCACCTTCCAGGAGCAGC	3246	0.1549065430595808	No Hit
CCTCAGAGGAGGGCGGGAACAGAGTGACAGTGGGGTTGGCCTTGGGCTGA	2601	0.12412566805236279	No Hit
GGGTTAGAGTTGGGAACCTATGAACATTCTGTAGGGGCCACTGTCTTCTCCACGGTGCTCCCTTCATGCGTGAC	2466	0.11768315932992182	No Hit
GCCTTGGGCTGACCGAGGACGGTGACTTTGGTCCCAGTTCCGAAGACATAAGCACTCAGGCTGCTGTCATAGGA	2285	0.10904542541316763	No Hit
CCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGT	2282	0.10890225855266894	No Hit
GCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGC	2164	0.10327102870638721	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	3115	42.23403	1
GTATCAA	7715	40.220367	1
GTGGTAT	1215	39.96686	1
TGGTATC	1310	37.047226	2
TATCAAC	8625	35.796555	2
TCAACGC	9295	33.087624	4
CAACGCA	9490	32.466988	5
AACGCAG	9655	32.018105	6
ATCAACG	9715	31.68895	3
AGAGTAC	10685	28.480932	11
CAGAGTA	10965	28.036242	10
ACGCAGA	11060	27.733313	7
CGCAGAG	11205	27.466387	8
GCAGAGT	11555	26.87224	9
GAGTACG	7180	24.302147	12
AGTACGG	7560	23.126045	13
GAGTACT	5605	23.103148	12
AGTACTT	5635	22.736324	13
GTACTTT	5820	22.135342	14
GTACGGG	8115	21.590343	14