FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005756500

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005756500
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1130329
Sequences flagged as poor quality0
Sequence length20-76
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCTTACACTGGTACCAGCACAAACCAGGTCAGTCTCCAAAGCTCTTCAT18650.1649962090683332No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT18140.16048424839139755No Hit
GTATTACTGTCATCAGACTACTAGTTTACCTCAGACGTTCGGCCAAGGGA17220.1523450252094744No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG15920.14084394897414823No Hit
CAGTAATACATTGCGGCATCTTCAGCCTCCGGGCTATCGATGGTGAGGGTGAAATCTGTCCCAGATCCACTGCCA13900.12297304590079526No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)