EGAF00005756566 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005756566
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	776832
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1340	0.1724954687757456	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	1126	0.14494768495633548	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	1063	0.13683782336463998	No Hit
GTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGTTGGATCCGGCTGCC	1012	0.1302726973142198	No Hit
GTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGG	811	0.10439837699785796	No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCAGCCTGACCTGCCTGGTCAAAGGCTT	789	0.1015663618388532	No Hit
GTATGTACAGGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC	784	0.10092272202998846	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTGGTAT	435	0.0	46.732613	1
GTATCAA	3080	0.0	40.04881	1
TATCAAC	3515	0.0	34.880764	2
GAGGTAT	100	2.35263E-4	33.144997	70
TCAACGC	3730	0.0	32.467392	4
ATCAACG	3775	0.0	32.28343	3
GGTATCA	1740	0.0	31.287088	1
CAACGCA	3880	0.0	31.284763	5
AACGCAG	3905	0.0	31.172535	6
CGCAGAG	4320	0.0	28.337147	8
AGAGTAC	4330	0.0	28.271702	11
ACGCAGA	4325	0.0	28.145374	7
GCAGAGT	4405	0.0	27.94647	9
GTACGCA	50	0.0073068296	27.922697	57
CAGAGTA	4400	0.0	27.900076	10
AACGAAC	110	1.0661206E-6	25.314808	51
GAGTACG	3265	0.0	25.06592	12
AATAGCG	85	1.300479E-4	24.728148	62
AGTACGG	3290	0.0	24.666412	13
TTCGGGG	480	0.0	23.477705	70