EGAF00005756756 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005756756
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	713050
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATATTATAGTGATCCTCCCACTTTTGGCCAGGGGACCAAGCTGGAGATCAGACGAACTGTGGCTGCACCAT	1849	0.25930860388472055	No Hit
CTATAATATTGCTGACAGTAATAAACGGCCACATCTTCAGCCTGCAGGCTGCTTATGGTGAGAGTGAAATCTGTC	1747	0.24500385667204266	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	1284	0.1800715237360634	No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC	1241	0.1740410910875815	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1205	0.1689923567772246	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	1067	0.14963887525418976	No Hit
GGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCC	935	0.13112684944954772	No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC	857	0.12018792511044106	No Hit
GCTTATGGTGAGAGTGAAATCTGTCCCAGACCCGCTGCCACTGAATCGGT	845	0.11850501367365542	No Hit
GGTTAGGAGGCTGTCCGGGTTTCTGTTGGTACCAAGCTAAGTAGTTCTTATTGTGGGAGCTGGATAAAACACT	830	0.11640137437767338	No Hit
CAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATG	829	0.11626113175794124	No Hit
GTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGC	802	0.11247458102517355	No Hit
GAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCT	799	0.11205385316597714	No Hit
GTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAA	799	0.11205385316597714	No Hit
GTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCT	792	0.11107215482785218	No Hit
CAATAGGGGTAGGTCCCCTGTGGAAAAAGGGTCAGAGGCCAAAGGATGGGAGGGGGTCAGGCTGGAACTGAGGAG	792	0.11107215482785218	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	3070	0.0	40.381798	1
GGTATCA	1335	0.0	40.274837	1
GCGTTTA	35	0.0012776931	39.857265	48
TAGTTAG	80	8.2348015E-5	39.620514	70
GTGGTAT	365	0.0	38.4686	1
TGGTATC	385	0.0	36.460007	2
TATCAAC	3490	0.0	35.315933	2
CGTTTAA	40	0.002459849	34.880093	49
TCAACGC	3560	0.0	34.813858	4
CAACGCA	3655	0.0	33.90898	5
ATCAACG	3645	0.0	33.908085	3
AACGCAG	3685	0.0	33.725838	6
CGCAGAG	3940	0.0	31.47825	8
AGAGTAC	3975	0.0	31.459658	11
CAGAGTA	3980	0.0	31.420135	10
ATAATAC	110	1.1477823E-9	31.124395	3
ACGCAGA	4020	0.0	30.841	7
TTAGTAC	45	0.0047979024	30.432741	3
GCAGAGT	4170	0.0	29.988522	9
CGGGATT	165	0.0	29.063702	17