EGAF00005756962 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005756962
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1359067
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTACTACAGTCCGTCCCTCAAGAGTCGAGTCTCCATATCGGTTGACACGTCCAGGAACCAGTTCTCCCTGAGG	2244	0.16511327256124975	No Hit
GTAGTAGGTACTCCCTTCATAAGAGATACTCCCAATCCACTCCAGCCCCTTCCCGGGGGGCTGGCGGATCCAGCC	2233	0.16430389377418478	No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCAGCCTGACCTGCCTGGTCAAAGGCTT	2063	0.15179531251954465	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	1953	0.14370152464889516	No Hit
GTAAAAGACAGCCGTGTCAGCGGCGGTCACAGAGCTCAGCCTCAGGGAGA	1874	0.13788871335997416	No Hit
GCCCAGGGCCGCTGTGCCCCCAGAGGTGCTCTTGGAGGAGGGTGCCAGGG	1649	0.1213332381700093	No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCAGAC	1594	0.11728634423468452	No Hit
GTATGTACAGGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC	1433	0.10543998198764298	No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT	1427	0.10499850264924393	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTATACG	40	4.968332E-5	43.17512	35
GGTATCA	1170	0.0	38.890884	1
CGATTGT	90	1.2333802E-4	36.998768	70
GTATCAA	2415	0.0	35.542007	1
AACCGAT	970	0.0	33.642178	70
TATCAAC	2770	0.0	30.609142	2
ATCAACG	2835	0.0	29.907347	3
TCAACGC	2815	0.0	29.874954	4
CAACGCA	2830	0.0	29.838398	5
AACGCAG	2910	0.0	29.022367	6
GTGGTAT	695	0.0	27.775566	1
TGGTATC	685	0.0	27.673746	2
AGAGTAC	3170	0.0	26.120375	11
CGCAGAG	3295	0.0	25.545467	8
TCGATTG	100	1.1959615E-4	25.036684	69
ACGCAGA	3415	0.0	24.74155	7
CAGAGTA	3360	0.0	24.643332	10
ATACGAA	85	1.4278601E-4	24.392035	37
GCAGAGT	3490	0.0	24.021952	9
TATACGA	75	0.0019776684	23.030977	36