EGAF00005757332 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757332
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	331855
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATGTACAGGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC	671	0.20219674255322354	No Hit
GGGCAGCGCTGGGTGCTTTATTTCCATGCTGGGCGCCCGGGAAGTATGTA	480	0.1446414849859125	No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCAGCCTGACCTGCCTGGTCAAAGGCTT	467	0.14072411143421074	No Hit
CTACAAGACCACGCCTCCCGTGCTGGACTCCGACGGCTCCTTCTTCCTCTACAGCAAGCTCACCGTGGACAAGAG	395	0.11902788868632383	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	392	0.11812387940516189	No Hit
CATTTACCCGGAGACAGGGAGAGGCTCTTCTGCGTGTAGTGGTTGTGCAG	369	0.11119314158292025	No Hit
GTACAGGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCCGGGGAGCGGGGGCTTGCCGGCCGTCGCA	342	0.10305705805246268	No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCGTTGAACAAACGAACCTTTAATAGCGGCTGCAC	337	0.10155037591719274	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACCGA	20	0.0074396036	51.599525	18
GACCAAT	35	2.31289E-5	49.12759	7
TCGTAAA	30	6.0519855E-4	46.38364	49
GTGGTAT	175	0.0	45.204197	1
TGGTATC	175	0.0	43.22577	2
CGCATAA	60	0.0010710194	41.29705	70
GAAACGC	35	0.0012896408	39.775593	51
CGTAAAC	35	0.0012925452	39.7574	50
GTCGTAA	35	0.0012944844	39.745285	48
GACCGGA	65	0.0015874408	38.120354	70
CTATTAT	65	0.0015874408	38.120354	70
GTATCAA	1150	0.0	37.98349	1
GGTATCA	490	0.0	37.202213	1
GTAACAT	40	0.0024938507	34.777126	48
TGCGGGT	40	0.0026135237	34.446415	31
TCAACGC	1285	0.0	33.98276	4
ATCAACG	1290	0.0	33.851048	3
CAACGCA	1295	0.0	33.72035	5
AACGCAG	1340	0.0	33.106133	6
CGACCGG	75	0.003203453	33.03764	70