FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005757351

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005757351
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1493099
Sequences flagged as poor quality0
Sequence length20-76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGT63930.4281698668340143No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT18860.1263144640777336No Hit
CTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGGCAGCACTTCC15020.10059614265363515No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)