EGAF00005757374 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757374
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	42470
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	3576	8.420061219684483	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	104	0.24487873793265835	No Hit
CTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGGCAGCACTTCC	92	0.21662349894042854	No Hit
GTATCAACGCAGAGTACGGGCTAGTCCCTGTTCCCAGAGCCCACTTTTTTTTCTTTTTTTGAAATAAAATAGC	88	0.20720508594301862	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	62	0.145985401459854	No Hit
CTGAAAGACAGGCTATTTTATTTCAAAAAAAGAAAAAAAAGTGGGCTCTGGGAACAGGGACTAGCCCGTACTCTG	59	0.13892159171179655	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	52	0.12243936896632918	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	51	0.12008476571697668	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	43	0.1012479397221568	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCTATCT	15	6.211779E-4	96.27549	69
GTCCCTA	15	0.0011327051	82.79692	66
TGGTCCC	15	0.0012329621	81.0512	64
GCGTTCA	15	0.0012478072	80.80781	62
CTATCTT	25	0.0012578579	80.52569	70
TCGCGTT	15	0.0013008171	79.96731	60
CTGGGTT	20	8.9062785E-5	68.210396	37
GCTGGGT	20	9.075645E-5	67.95202	36
AGCTGGG	20	9.480816E-5	67.3567	35
CCCTATC	20	0.0028643825	65.52516	68
GTGAGAC	25	1.569821E-4	60.8113	53
TTGGTCC	20	0.0039051224	60.605854	63
AGTTTGG	20	0.0040705996	59.97548	60
CAGTTTG	20	0.00426605	59.270927	59
AACGTCG	25	1.8519767E-4	58.81749	47
AAACGTC	25	1.8771956E-4	58.657215	46
ACAGTTT	20	0.004468407	58.58273	58
TAAAACG	25	1.9155351E-4	58.418453	44
GTTTAAA	25	2.2016976E-4	56.8	41
GTGAGCT	25	3.1527434E-4	52.827484	32