EGAF00005757400 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757400
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	111024
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	870	0.7836143536532642	No Hit
CAATTAAACTATGCAAAAGATTCGCTCGGGGCAAAAATTCGCGCGATTCT	254	0.22877936302060814	No Hit
CTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGGCAGCACTTCC	244	0.21977230148436375	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	141	0.12699956766104625	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	118	0.10628332612768411	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	113	0.10177979535956189	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCTGCGT	25	0.0010554487	84.35551	70
AGTATGT	20	0.0023834035	68.736565	69
CCATATC	15	0.0026231857	67.11121	31
ATAACAG	15	0.0027938662	66.053154	5
TAATCCA	15	0.0027938662	66.053154	4
AATGTCT	20	0.0068584573	52.646484	42
TATAACC	30	3.3956903E-4	52.11016	67
AACCAAG	55	3.7159183E-4	51.12455	70
AGTTCCT	20	0.007986996	50.657993	33
GTGGATT	20	0.008677544	49.606903	21
CCTTCAC	20	0.008693032	49.584538	16
ATCCTAT	20	0.008693032	49.584538	16
AATCCTA	20	0.00872407	49.539867	15
TACTGGC	20	0.00872407	49.539867	14
TGTACTG	20	0.00872407	49.539867	12
TGCTTGT	40	6.432999E-5	41.283222	14
ATAACCA	40	0.0011242497	40.869007	68
TAACCAA	45	0.001142124	40.732777	69
TTGTACT	35	0.0016637341	37.744656	11
GTGGTAT	170	0.0	36.99538	1