EGAF00005757407 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757407
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	980800
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGGACTCCTATCTCGTATGCCGT	6221	0.6342781402936378	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1331	0.13570554649265906	No Hit
ATACACATCTCCGAGCCCACGAGACGGACTCCTATCTCGTATGCCGTCTT	1029	0.10491435562805873	RNA PCR Primer, Index 27 (95% over 23bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGGGGG	1155	55.512558	70
GTGGTAT	870	54.2729	1
CTTATAC	1300	46.17968	1
TATACAC	1370	44.772873	3
CTCGTAT	1240	41.42697	39
TCGTATG	1365	41.30504	40
TAGCTCG	135	40.551796	36
CGTATGC	1410	40.356712	41
GTATGCC	1430	40.16353	42
TATGCCG	1465	39.052765	43
TTATACA	1600	38.547413	2
TCTCGTA	1235	37.86096	38
ATACACA	1615	37.772015	4
AGACGGA	1540	37.6842	25
TATCTCG	1240	37.52676	36
CCGTCTT	1480	36.93517	47
GACGGAC	1565	36.885452	26
CTCCTAT	1430	36.6163	32
TCCTATC	1305	36.51921	33
ATGCCGT	1540	36.323326	44